Media and Public Lectures

DevoWorm Media

Physical Intelligence in Development: regulation of dynamic tension and sensing as intersecting networks. Dynamics Days 2023, Trinity College and Virtual, January 2023. YouTube

Embryo Networks, Computational Development, and Neurosimulation. General audience virtual lecture (December 2022). YouTube

DevoWorm Update to OpenWorm Foundation for 2022 (November). Orthogonal Research and Education Lab Open House. YouTube

Embodied Hypergraphs: analyzing interactions in time-dependent systems. SIAM Workshop on Network Science 2022, Evanston, IL and Virtual. Slideshow YouTube

Mathematics of DevoWorm. Finding Your Inner Modeler V. University of Illinois-Chicago and Virtual. YouTube

Hypergraphs Demonstrate Anastomoses During Divergent Integration. NetSci 2022, Shanghai and Virtual. Slideshow YouTube

DevoWorm 2021 Update (September). Presented at the OpenWorm Foundation annual meeting. Slideshow

Generative Divergent Integration as a Theory of the Emergent Connectome. Advanced Computational Neuroscience Network, Beckman Institute, UIUC. September, 2021. Slideshow YouTube

Game Theory of Developmental Processes. Dynamics Days XL, Nice, France and Virtual. July 2021. Slideshow YouTube

Euler Cycles for "Life". TopoNets Satellite Session, Networks 2021, Virtual. July 2021. Slideshow YouTube

Embryo Networks as Generative Divergent Integration. Networks 2021, Virtual. July 2021. Slideshow YouTube

DevoLearn: a platform for open Developmental Data Science, Machine Learning, and Education. INCF Assembly (May 2021) and OSF Education Unconference (February 2021), Virtual.

The Psychophysics of Non-neuronal Cognition. Presented at Neuromatch 3, Virtual. October 2020. Slideshow YouTube

Contrast Between Biological and Artificial Neural Network (BNNs and ANNs). Presented by Krishna Katyal at Neuromatch 3, October 2020. Slideshow YouTube

DevoWorm 2020 Update (September). Presented at the OpenWorm Foundation annual meeting. Slideshow

Tutorial for DevoLearn. Presented by Ujjwal Singh, August 2020. YouTube

OpenWorm, Model Realism, and the Truth! Presented at the Alife 2020 Conference, July 2020. Slideshow

Virtual Coffee Hours/Hackathons. YouTube playlist. Summer 2020.

How has the Google Summer of Code (through INCF sponsorship) helped our organization? INCF Google Summer of Code Mentoring Meeting, Virtual.

Developing the Virtual Worm Via Data-theoretical Synthesis. Presented to the Virtual Worm Lecture Series, May 2020. Slideshow YouTube

Process as Connectivity: towards biology-specific complex networks. Presented to the Neuromatch un-conference, April 2020. Slideshow YouTube

Structuredness as a Measure of the Structural Complexity. Presented to the DevoWorm group weekly meeting, March 16, 2020. YouTube Slideshow

Process as Connectivity: models of interaction in cellular systems. Presented to Finding Your Inner Modeler II Workshop, University of Illinois-Chicago, August 2018. Slideshow

Student Presentation, Arnab Banerjee (Pune University), Google Summer of Code Project Proposal, May 12th, 2018. YouTube Slides

Topical Presentation, Michael Cooper-Stachkowski (University of Waterloo) on Mechanosensation in C. elegans, December 14th, 2017 YouTube Slides

Student Presentation, Josh Desmond (Worcester Polytechnic University), Google Summer of Code Project Proposal, June 5th, 2017. YouTube

Network Architecture of Embryo Developmental Regulation. Conference Presentation. Network Frontiers (2016) version NetSci (2017) version

Student Presentation, Siddharth Yadav (IIT New Delhi), Google Summer of Code project proposal, May 27th, 2017. YouTube

Public Lecture (hosted by Orthogonal Research) Steven McGrew (New Light Limited), Principles of Ptychography. May 15th, 2017. YouTube

Developmental connectome during embryogenesis (Caenorhabditis elegans). doi:10.13140/RG.2.2.33909.78566 YouTube

Tutorial on Morphozoic at the OpenWorm Open House with Tom Portegys (presenter) and Bradly Alicea (moderator). October 25th, 2016 YouTube

Project Summary (5-minute Flash Talk) at the OpenWorm Open House, October 25th, 2016. YouTube

45-second project preview video YouTube

OpenWorm Open House Supplemental Materials, doi:10.6084/m9.figshare.4331036

Public Lecture (hosted by Orthogonal Research): Yorgos Nikas (Athens Innovative Microscopy), High-resolution Microscopy of the Embryo. October 18th, 2016 YouTube

Public Lecture (hosted by Orthogonal Research): Dr. Susan Crawford-Young (Red River College, Manitoba, Canada), Axolotl Egg-Embryo Experiments. June 27th, 2016. Talk YouTube

Public Lecture (hosted by Orthogonal Research): Dr. Ken Ho (RIKEN, Japan), Biological Dynamics Markup Language (BDML) and the Systems Science of Biological Dynamics (SSBD) database. June 6th, 2016. Paper YouTube

Public lecture, OpenWorm Seminar Series: DevoWorm: developing the worm (and Ascidian, and graph, and digital embryo). April 15th, 2016. YouTube Blogpost PowerPoint version

Public lecture, Biocomplexity Institute @ Indiana University, Bloomington: DevoWorm: developing models of the (Open)Worm. May 20th, 2015 Blogpost PowerPoint version

Public lecture, OpenWorm Seminar Series: DevoWorm: raising the (Open)Worm. September 12th, 2014. YouTube Blogpost PowerPoint version